| 1st | 60 | Naoki Hattori / Ralf Schumacher | McLaren F1 GTR | Team Lark McLaren GTR | 1:29.5280 |
| 2nd | 37 | Erik Comas / Hidetoshi Mitsusada | Toyota Supra (JZA80) | Toyota Castrol Team | 1:30.0690 |
| 3rd | 61 | David Brabham / John Nielsen | McLaren F1 GTR | Team Lark McLaren GTR | 1:30.2550 |
| 4th | 36 | Masanori Sekiya / Pedro de la Rosa | Toyota Supra (JZA80) | Toyota Castrol Team | 1:30.8720 |
| 5th | 39 | Wayne Gardner / Alain Ferté | Toyota Supra (JZA80) | Toyota Team SARD | 1:31.2500 |
| 6th | 34 | Hideshi Matsuda / Osamu Nakako | Porsche 911 GT2 | Team Taisan | 1:31.2790 |
| 7th | 30 | Youji Yamada / Eiichi Tajima | Porsche 911 GT2 | Team Take One | 1:31.4530 |
| 8th | 35 | Oscar Larrauri / Takeshi Tsuchiya | Porsche 911 GT2 | Team Taisan | 1:31.7350 |
| 9th | 3 | Masahiro Hasemi / Tetsuya Tanaka | Nissan Skyline GT-R (BCNR33) | Hasemi Motorsports | 1:32.2980 |
| 10th | 55 | Kenji Tohira / Hiroyuki Kawai | Nissan Skyline GT-R (BCNR33) | Limit Motor Sports | 1:32.3910 |
| 11th | 1 | Kazuyoshi Hoshino / Masahiko Kageyama | Nissan Skyline GT-R (BCNR33) | Hoshino Racing | 1:32.4980 |
| 12th | 2 | Aguri Suzuki / Hideo Fukuyama | Nissan Skyline GT-R (BCNR33) | Nismo Team Zexel | 1:32.5890 |
| 13th | 556 | Toshio Suzuki / Masahiko Kondou | Nissan Skyline GT-R (BCNR33) | Nismo Kure Racing | 1:32.8270 |
| 14th | 88 | Takao Wada / Satoshi Ikezawa | Lamborghini Diablo Jota | Kenwolf with JLOC Corsa | 1:32.9070 |
| 15th | 8 | Tom Kristensen / Tatsuya Tanigawa | Toyota Supra (JZA80) | FET Racing Team | 1:33.2850 |
| 16th | 43 | Yukio Okamoto / Yasutaka Hinoi | Porsche 911 Carrera RS | Team BMB Minijuke | 1:33.6740 |
| 17th | 100 | Kunimitsu Takahashi / Keiichi Tsuchiya | Honda NSX (NA1) | Team Kunimitsu | 1:33.7910 |
| 18th | 25 | Masami Kageyama / Yuuji Tachikawa | Nissan 300ZX-GTS | Bros Factory | 1:34.1870 |
| 19th | 19 | Katsuo Kobayashi / Naohiro Furuya | Nissan Skyline (BNR32) | Team-Jun | 1:34.3490 |
| 20th | 69 | Kenji Kawagoe / Syunji Kasuya | Porsche 911 GT2 | Kenji Kawagoe | 1:34.3690 |
| 21st | 5 | Kaoru Iida / Tetsuya Oota | Porsche 911 GT2 | Taku Motor Sports | 1:34.4590 |
| 22nd | 26 | Keiichi Suzuki / Morio Nitta | Porsche 964 Carrera RSR | Team Taisan Jr. | 1:38.3510 |
| 23rd | 72 | Takayuki Kinoshita / Norio Makiguchi | BMW M3 (E30) | Makiguchi Engineering | 1:38.4400 |
| 24th | 910 | Seiichi Sodeyama / Naoki Nagasaka | Porsche 993 RSR | 910 Racing | 1:38.4530 |
| 25th | 15 | Motoji Sekine / Tarou Kouno | Porsche 911 Turbo | Prova Motor Sports | 1:38.4560 |
| 26th | 6 | Tetsuya Kawasaki / Kazuteru Wakita | Toyota MR-2 (SW-20) | imuraya Racing Team | 1:39.1900 |
| 27th | 7 | Shin'ichi Yamaji / Hisashi Wada | Mazda RX-7 (FD3S) | RE Amemiya Racing | 1:39.2050 |
| 28th | 31 | Katsunori Iketani / Kazuo Mogi | Porsche 993 Carrera RS | Cobra Racing Team | 1:39.3030 |
| 29th | 51 | Masamitsu Ishihara / Hiroyuki Nodi | Porsche 911 Carrera RSR | Cobra Racing Team | 1:40.8940 |
| 30th | 21 | Fuminori Mizuno / Yasushi Hitotsuyama | BMW M3 (E36) | Hitotsuyama Racing | 1:41.0180 |
| 31st | 11 | Hiromoto Ishimori / Masuo Saitou | Nissan Skyline GTS-R (HR31) | M Factory Racing Club | 1:41.1710 |
| 32nd | 95 | Nobuyuki Ohyagi / Tsuneaki Mankumo | Nissan Silvia (PS13) | Team Daishin | 1:41.5610 |
| 33rd | 20 | Kenji Takahashi / Hiroaki Suga | Porsche 993 RS | AI Auto Racing Team | 1:42.1800 |
| 34th | 70 | Yoshimi Ishibashi / Kaoru Hoshino | Porsche 993 RS | Yoshimi Ishibashi | 1:42.4110 |
| 35th | 14 | Akira Nagai / Takashige Kogayu | Mitsubishi Mirage (C53A) | Eimei Auto | 1:42.5970 |
| 36th | 17 | Toshihiko Nogami / Koshimizu Toshiaki | Mazda RX-7 (FD3S) | Kageisen Racing Team | 1:43.8600 |