| 1st | 7 | Kamui Kobayashi / Mike Conway / Stéphane Sarrazin | Toyota TS050 Hybrid | Toyota Gazoo Racing | 3:18.1320 | 247.6000 |
| 2nd | 8 | Sébastien Buemi / Kazuki Nakajima / Anthony Davidson | Toyota TS050 Hybrid | Toyota Gazoo Racing | 3:19.2900 | 246.2000 |
| 3rd | 9 | José Maria Lopez / Nicolas Lapierre / Yuuji Kunimoto | Toyota TS050 Hybrid | Toyota Gazoo Racing | 3:21.4550 | 243.6000 |
| 4th | 2 | Earl Bamber / Timo Bernhard / Brendon Hartley / Marc Lieb | Porsche 919 Hybrid | Porsche LMP Team | 3:21.5120 | 243.5000 |
| 5th | 1 | Neel Jani / Andre Lotterer / Nick Tandy / Marc Lieb | Porsche 919 Hybrid | Porsche LMP Team | 3:22.1000 | 242.8000 |
| 6th | 35 | André Negrão / Nelson Panciatici / Pierre Ragues | Alpine A470 Gibson | Signatech Alpine Matmut | 3:28.1460 | 235.7000 |
| 7th | 4 | Dominik Kraihamer / Marco Bonanomi / Oliver Webb | Enso CLM P1/01 Nismo | Bykolles Racing Team | 3:28.7010 | 235.1000 |
| 8th | 24 | Jean-Eric Vergne / Jonathan Hirschi / Tor Graves | Oreca 07 Gibson | CEFC Manor TRS Racing | 3:28.8440 | 234.9000 |
| 9th | 37 | Alex Brundle / Tristan Gommendy / David Cheng | Oreca 07 Gibson | Jackie Chan DC Racing | 3:29.1040 | 234.6000 |
| 10th | 26 | Alex Lynn / Laurens Vanthoor / Roman Rusinov / Pierre Thiriet | Oreca 07 Gibson | G-Drive Racing | 3:29.1130 | 234.6000 |
| 11th | 38 | Ho-Pin Tung / Oliver Jarvis / Thomas Laurent | Oreca 07 Gibson | Jackie Chan DC Racing | 3:29.9240 | 233.7000 |
| 12th | 13 | Mathias Beche / Nelson Piquet, Jr. / David Heinemeier Hansson | Oreca 07 Gibson | Vaillante Rebellion | 3:30.1500 | 233.5000 |
| 13th | 28 | Nicky Catsburg / Emmanuel Collard / François Perrodo / Matthieu Vaxiviere | Oreca 07 Gibson | TDS Racing | 3:30.3750 | 233.2000 |
| 14th | 36 | Romain Dumas / Gustavo Menezes / Matthew Rao | Alpine A470 Gibson | Signatech Alpine Matmut | 3:30.5010 | 233.1000 |
| 15th | 40 | Richard Bradley / James Allen / Franck Matelli | Oreca 07 Gibson | Graff | 3:30.5250 | 233.1000 |
| 16th | 31 | Bruno Senna / Julien Canal / Nicolas Prost | Oreca 07 Gibson | Vaillante Rebellion | 3:30.5350 | 233.0000 |
| 17th | 25 | Vitaly Petrov / Simon Trummer / Roberto Gonzalez | Oreca 07 Gibson | CEFC Manor TRS Racing | 3:30.5700 | 233.0000 |
| 18th | 21 | Ben Hanley / Felix Rosenqvist / Henrik Hedman | Oreca 07 Gibson | Dragonspeed - 10 Star | 3:30.6930 | 232.9000 |
| 19th | 22 | Ryō Hirakawa / Nicolas Minassian / Memo Rojas / Jose Gutierrez | Oreca 07 Gibson | G-Drive Racing | 3:31.1500 | 232.4000 |
| 20th | 32 | Filipe Albuquerque / Hugo de Sadeleer / William Owen | Ligier JS P217 Gibson | United Autosports | 3:31.9070 | 231.5000 |
| 21st | 47 | Andrea Belicchi / Giorgio Sernagiotto / Roberto Lacorte | Dallara P217 Gibson | Cetilar Villorba Corse | 3:32.5670 | 230.8000 |
| 22nd | 29 | Rubens Barrichello / Jan Lammers / Frits van Eerd | Dallara P217 Gibson | Racing Team Nederland | 3:33.3040 | 230.0000 |
| 23rd | 23 | Nathanaël Berthon / Timothe Buret / Fabien Barthez / Simon Gachet | Ligier JS P217 Gibson | Panis Barthez Competition | 3:33.6900 | 229.6000 |
| 24th | 27 | Victor Shaytar / Sergey Sirotkin / Maurizio Mediani | Dallara P217 Gibson | SMP Racing | 3:33.7870 | 229.5000 |
| 25th | 34 | Karun Chandhok / Nigel Moore / Phil Hanson | Ligier JS P217 Gibson | Tockwith Motorsports | 3:34.3850 | 228.9000 |
| 26th | 39 | Enzo Guibbert / Eric Trouillet / James Winslow | Oreca 07 Gibson | Graff | 3:34.4040 | 228.8000 |
| 27th | 17 | Paul-Loup Chatin / Paul Lafargue / David Zollinger / Patrice Lafargue | Ligier JS P217 Gibson | Idec Sport Racing | 3:35.9680 | 227.2000 |
| 28th | 45 | Matthew McMurry / Vincent Capillaire / Mark Patterson / Dean Koutsoumidis | Ligier JS P217 Gibson | Algarve Pro Racing | 3:36.5440 | 226.6000 |
| 29th | 43 | Ricky Taylor / Jeroen Bleekemolen / Ben Keating / Nick de Brujin | Riley Mk.30 Gibson | Keating Motorsports | 3:38.6710 | 224.4000 |
| 30th | 49 | Konstantin Calko / Rik Breukers / Miro Konôpka | Ligier JS P217 Gibson | ARC Bratislava | 3:38.9050 | 224.1000 |
| 31st | 33 | Pierre Nicolet / Jacques Nicolet / Erik Maris | Ligier JS P217 Gibson | Eurasia Motorsport | 3:43.8170 | 219.2000 |
| 32nd | 64 | Oliver Gavin / Marcel Fässler / Tommy Milner | Chevrolet Corvette C7.R | Corvette Racing - GM | 3:54.7010 | 209.1000 |
| 33rd | 91 | Frédéric Makowiecki / Patrick Pilet / Richard Lietz / Laurens Vanthoor | Porsche 991 RSR | Porsche GT Team | 3:54.9960 | 208.8000 |
| 34th | 92 | Kevin Estre / Michael Christensen / Dirk Werner | Porsche 991 RSR | Porsche GT Team | 3:54.9990 | 208.8000 |
| 35th | 63 | Antonio Garcia / Jordan Taylor / Jan Magnussen | Chevrolet Corvette C7.R | Corvette Racing - GM | 3:55.0640 | 208.7000 |
| 36th | 95 | Marco Sørensen / Nicki Thiim / Ritchie Stanaway | Aston Martin V8 Vantage GTE | Aston Martin Racing | 3:55.2510 | 208.6000 |
| 37th | 97 | Jonathan Adam / Daniel Serra / Darren Turner | Aston Martin V8 Vantage GTE | Aston Martin Racing | 3:55.2660 | 208.5000 |
| 38th | 71 | Davide Rigon / Miguel Molina / Sam Bird | Ferrari 488 GTE | AF Corse | 3:55.3850 | 208.4000 |
| 39th | 51 | James Calado / Lucas di Grassi / Alessandro Pier Guidi | Ferrari 488 GTE | AF Corse | 3:55.8270 | 208.1000 |
| 40th | 82 | Pierre Kaffer / Giancarlo Fisichella / Toni Vilander | Ferrari 488 GTE | Risi Competizione | 3:55.8470 | 208.0000 |
| 41st | 69 | Richard Westbrook / Ryan Briscoe | Ford GT | Ford Chip Ganassi Team USA | 3:57.5360 | 206.6000 |
| 42nd | 67 | Harry Tincknell / Pipo Derani / Andy Priaulx | Ford GT | Ford Chip Ganassi Team UK | 3:57.8810 | 206.3000 |
| 43rd | 68 | Joey Hand / Dirk Müller | Ford GT | Ford Chip Ganassi Team USA | 3:58.0110 | 206.1000 |
| 44th | 66 | Billy Johnson / Olivier Pla / Stefan Mücke | Ford GT | Ford Chip Ganassi Team UK | 3:58.1810 | 206.0000 |
| 45th | 98 | Pedro Lamy / Mathias Lauda / Paul Dalla Lana | Aston Martin V8 Vantage GTE | Aston Martin Racing | 3:58.2500 | 205.9000 |
| 46th | 50 | Fernando Rees / Romain Brandela / Christian Philippon | Chevrolet Corvette C7.R | Larbre Competition | 3:58.3020 | 205.9000 |
| 47th | 77 | Matteo Cairoli / Marvin Dienst / Christian Ried / Julien Piguet | Porsche 991 RSR | Dempsey - Proton Racing | 3:58.4490 | 205.8000 |
| 48th | 62 | Townsend Bell / Bill Sweedler / Cooper MacNeil | Ferrari 488 GTE | Scuderia Corsa | 3:58.5990 | 205.6000 |
| 49th | 55 | Marco Cioci / Duncan Cameron / Aaron Scott | Ferrari 488 GTE | Spirit of Race | 3:58.8040 | 205.5000 |
| 50th | 99 | Ross Gunn / Oliver Bryant / Andrew Howard | Aston Martin V8 Vantage GTE | Beechdean AMR | 3:58.8850 | 205.4000 |
| 51st | 90 | Euan Hankey / Salih Yoluc | Aston Martin V8 Vantage GTE | TF Sport | 3:59.1400 | 205.2000 |
| 52nd | 83 | Andrea Bertolini / Niclas Jönsson / Tracy Krohn | Ferrari 488 GTE | DH Racing | 3:59.1740 | 205.1000 |
| 53rd | 61 | Keita Sawa / Matt Griffin / Weng Sun Mok | Ferrari 488 GTE | Clearwater Racing | 3:59.2760 | 205.1000 |
| 54th | 88 | Klaus Bachler / Khaled Al Qubaisi / Stéphane Lémeret | Porsche 991 RSR | Proton Competition | 3:59.2770 | 205.1000 |
| 55th | 86 | Ben Barker / Nicholas Foster / Mike Wainwright | Porsche 991 RSR (2016) | Gulf Racing UK | 3:59.5820 | 204.8000 |
| 56th | 65 | Alessandro Balzan / Christina Nielsen / Bret Curtis | Ferrari 488 GTE | Scuderia Corsa | 4:00.1200 | 204.3000 |
| 57th | 54 | Francesco Castellacci / Olivier Beretta / Thomas Flohr | Ferrari 488 GTE | Spirit of Race | 4:00.2130 | 204.3000 |
| 58th | 84 | Jonny Cocker / Dries Vanthoor / Will Stevens / Rob Smith | Ferrari 488 GTE | JMW Motorsport | 4:00.5230 | 204.0000 |
| 59th | 93 | Patrick Long / Abdulaziz Al Faisal / Mike Hedlund | Porsche 991 RSR | Proton Competition | 4:00.5560 | 204.0000 |
| 60th | 60 | Hiroki Katou / Richard Wee | Ferrari 488 GTE | Clearwater Racing | 4:05.2480 | 200.1000 |