| 1st | 100 | Kunimitsu Takahashi / Akira Iida / Takeshi Tsuchiya | Honda NSX (E-NA2) | Team Kunimitsu With Mooncraft | 2:03.0680 |
| 2nd | 16 | Osamu Nakako / Ryou Michigami / Katsutomo Kaneishi | Honda NSX (E-NA2) | Dome Mugen Project | 2:03.5070 |
| 3rd | 38 | Hironori Takeuchi / Yuuji Tachikawa / Masahiko Kondou | Toyota Supra (JZA80) | Toyota Team Cerumo | 2:05.9700 |
| 4th | 30 | Youji Yamada / Hideki Okada / Kazuo Mogi | McLaren F1 GTR (S70) | Team Take One | 2:06.0150 |
| 5th | 39 | Keiichi Tsuchiya / Masahiko Kageyama / Tatsuya Tanigawa | Toyota Supra (JZA80) | Toyota Team SARD | 2:07.2720 |
| 6th | 21 | Hiroki Katou / Seiji Ara / Hisashi Wada | Chrysler Viper GTS-R | Paul Belmondo Racing | 2:08.7160 |
| 7th | 7 | Wolfgang Kaufmann / Yukihiro Hane | Porsche 911 GT2 | Freisinger Motorsport | 2:13.1370 |
| 8th | 81 | Hideo Fukuyama / Nobuyuki Ohyagi / Takayuki Aoki | Nissan Silvia (S15) | Team Daishin | 2:13.4800 |
| 9th | 71 | Motoji Akita / Masaki Jounai / Naohiro Kawano | Porsche 911 GT2 | Sigmatech Racing Team | 2:16.9110 |
| 10th | 10 | Hidehiko Asou / Yasutaka Hinoi / Atsushi Yogou | Porsche 911 GT2 | Ability Motorsports | 2:17.2190 |
| 11th | 86 | Minoru Tanaka / Morio Nitta / Eiki Amemiya | Toyota Trueno (AE86) | Kraft | 2:17.7700 |
| 12th | 23 | Satoshi Motoyama / Masami Kageyama | Nissan Skyline GT-R (BNR34) | NISMO | 2:18.7600 |
| 13th | 70 | Yoshimi Ishibashi / Hiroshi Sakai / Darren Manning | Porsche 911 GT2 | Team Gaikokuya | 2:19.1550 |
| 14th | 111 | Jun'ichi Ikura / Yuusei Maki / Takahiko Date | Ferrari F355 (F40) | Team Gainer | 2:19.9190 |
| 15th | 51 | Masahiro Kimoto / Sumio Sakurai / Takashi Suzuki | Porsche 911 GT2 | Seikel Motorsport | 2:22.5910 |
| 16th | 5 | Kiyoshi Misaki / Seiichi Sodeyama / Hiroaki Suga | Nissan Skyline GT-R (BNR34) | Susuki Racing | 2:23.7850 |
| 17th | 27 | Norio Makiguchi / Hisashi Shimura / Takeshi Asami | BMW M3 | Makiguchi Engineering | 2:25.0380 |
| 18th | 2 | Hajime Ooshiro / Kazuho Takahashi / Shigekazu Saeki | Honda NSX (E-NA2) | American Racing | 2:27.7100 |
| 19th | 20 | Hideo Ogawa / Nobuo Komiya / Yasuo Kusakabe | Mitsubishi Lancer (CP9A) | RS Ogawa | 2:28.6170 |
| 20th | 33 | Naofumi Omoto / Shigekazu Wakisaka / Shin'ichi Hyoudou | Honda Integra (DC2) | Tracy Sports | 2:29.2190 |
| 21st | 19 | Kazuyoshi Honda / Takahisa Oono / Sadaaki Ko | Toyota Celica (ST205) | Mac Motorsports Club | 2:29.4880 |
| 22nd | 9 | Tsunefumi Hioki / Kiichi Takahashi / Tokiyasu Souda | Porsche 993 RSR | Team Daikokuya | 2:29.5740 |
| 23rd | 13 | Toshiaki Koshimizu / Takahiko Shimazawa / Yutaka Seki | Mitsubishi Lancer (CP9A) | Jmc Racing Division | 2:31.1060 |
| 24th | 6 | Haruo Yagyuu / Tomohiro Tomimasu / Michihiko Hashimoto | Mitsubishi Lancer Evo IV (CN9A) | Norty Racing Team | 2:31.4110 |
| 25th | 28 | Jun Satou / Hisataka Isoda / Seiji Satou | Honda Integra (DC2) | Swallow Racing | 2:32.3830 |
| 26th | 56 | Taiei Taniguchi / Takatoshi Tsuji | Toyota Corolla | Act Sports | 2:33.6140 |
| 27th | 22 | Motoji Sekine / Masami Miyoshi / Fumio Mutou | BMW M3 | Racing On Motorsports Division | 2:25.4720 |
| 28th | 8 | Ernst Palmberger / Michel Ligonnet | Porsche 996 GT2 | Freisinger Motorsport | no time |
| 29th | 66 | Tomohiko Tsutsumi / Takahiko Hara / Tomoyuki Hosono | Mazda RX-7 (FD3S) | Kageisen Racing | no time |