| 1st | 18 | Juichi Wakisaka / Katsutomo Kaneishi / Daisuke Itou | Honda NSX (GH-NA2) | Dome Mugen Project | 2:01.3480 |
| 2nd | 39 | Masahiko Kageyama / Ralph Firman / Manabu Orido | Toyota Supra (JZA80) | Toyota Team SARD | 2:03.6080 |
| 3rd | 38 | Hironori Takeuchi / Yuuji Tachikawa / Masahiko Kondou | Toyota Supra (JZA80) | Toyota Team Cerumo | 2:03.6770 |
| 4th | 30 | Hideki Okada / Masahiro Hasemi / Tetsuya Tanaka | McLaren F1 GTR (S70) | Team Take One | 2:04.1310 |
| 5th | 16 | Ryou Michigami / Hidetoshi Mitsusada / Yuuji Ide | Honda NSX (E-NA2) | Dome Mugen Project | 2:04.3830 |
| 6th | 14 | Julian Bailey / Jamie Campbell-Walter / David Warnock | Lister Storm | Lister Storm Racing | 2:05.7620 |
| 7th | 29 | Xavier Pompidou / Vincent Vosse / Stephen Watson | Chrysler Viper GTS-R | Chamberain Motorsport | 2:05.9110 |
| 8th | 23 | Ukyou Katayama / Nobuyuki Ohyagi / Takayuki Aoki | Nissan Skyline GT-R (BNR34) | NISMO | 2:06.7140 |
| 9th | 19 | Cor Euser / Herman Buurman / Jun Harada | Marcos Mantara LM600 | Marcos Racing International | 2:06.9210 |
| 10th | 7 | Wolfgang Kaufmann / Christophe Bouchut | Porsche 911 GT2 | Freisinger Motorsport | 2:07.3490 |
| 11th | 88 | Naohiro Furuya / Tsuyoshi Takahashi / Hisashi Wada | Lamborghini Diablo (ZA90DE068) | JLOC | 2:09.1050 |
| 12th | 22 | Masaki Yamamoto / Katsunori Yamamoto / Naoto Chikada | Oscar SK52 Toyota | | 2:12.5220 |
| 13th | 355 | Toshio Suzuki / Shin'ichi Yamaji / Takanori Michizaki | Ferrari F355 | Club Yellow Magic | 2:12.9730 |
| 14th | 15 | Dilantha Malagamuwa / Hideyuki Tamamoto / Tatsuya Tanigawa | RGS Mirage Chevrolet | Team Sri Lanka | 2:13.6200 |
| 15th | 100 | Masataka Matsuyama / Katsuyoshi Tanaka / Hikaru Miyagi | Oscar SK52 Toyota | | 2:13.8770 |
| 16th | 8 | Manfred Jurasz / Gottfried Grasser / Yukihiro Hane | Porsche 911 GT2 | Freisinger Motorsport | 2:13.8900 |
| 17th | 26 | Hideshi Matsuda / Hideo Fukuyama / Kazuyuki Nishizawa | Porsche 996 GT3-R | Team Taisan Jr. With Advan | 2:14.2680 |
| 18th | 25 | Motozou Fujikawa / Takahiko Shimazawa / Masayuki Ueda | Oscar SK52 Toyota | | 2:14.7700 |
| 19th | 52 | Naoki Furuya / Masayoshi Furuya / Hisashi Tsukahara | Oscar SK52 Toyota | CGRT | 2:15.7750 |
| 20th | 71 | Masaki Jounai / Naohiro Kawano / Atsushi Yogou | Porsche 911 GT2 | Sigmatech Racing Team | 2:16.3340 |
| 21st | 28 | Hiroaki Suga / Takashi Suzuki / Bagnall | Porsche 996 GT3-R | Team Taisan Jr. With Advan | 2:17.8160 |
| 22nd | 111 | Jun'ichi Ikura / Yuusei Maki / Takahiko Date | Ferrari F355 | Team Gainer | 2:18.0770 |
| 23rd | 70 | Yoshimi Ishibashi / Patrick van Schoote / Kaoru Hoshino | Porsche 911 GT2 (993GT2) | Team Gaikokuya | 2:18.2720 |
| 24th | 10 | Yasutaka Hinoi / Kengo Kitaura / Yutaka Yamagishi | Porsche 911 GT2 (911GT2) | Ability Motorsports | 2:18.4690 |
| 25th | 9 | Tsunefumi Hioki / Akira Watanabe / Akihiko Tsutsumi | Porsche 911 RSR (993RSR) | Susuki Racing | 2:18.8000 |
| 26th | 360 | Kota Sasaki / Seigou Nishizawa / Tetsuya Makino | Porsche 993 RSR | Dentaire Project Racing | 2:19.2700 |
| 27th | 5 | Kiyoshi Misaki / Seiichi Sodeyama / "HIDE" | Nissan Skyline GT-R (BNR34) | Auto Staff Racing Team | 2:20.6130 |
| 28th | 33 | Masami Miyoshi / Motoji Sekine / Takashi Ooi | BMW M3 | Racing On Motorsports Division | 2:22.1890 |
| 29th | 20 | Hideo Ogawa / Syouichi Itou / Nobuo Komiya | Mitsubishi Lancer (CP9A) | RS Ogawa | 2:24.2340 |
| 30th | 27 | Norio Makiguchi / Katsuo Kobayashi / Takeshi Asami | BMW M3 (M3) | Makiguchi Engineering | 2:24.8670 |
| 31st | 2 | Kazuho Takahashi / Hajime Ooshiro / Hiroshi Kimura | Honda NSX (E-NA2) | American Racing | 2:25.5910 |
| 32nd | 91 | Toshiaki Koshimizu / 'Bablin' Mishima / Yutaka Seki | Mitsubishi Lancer (CP9A) | | 2:27.2690 |
| 33rd | 6 | Haruo Yagyuu / Akihiro Tomimasu | Mitsubishi Lancer | | 2:29.1150 |
| 34th | 21 | Yoshinari Tomimoto / Ken'ya Nagano / Shin'ichi Hyoudou | Honda Integra | | 2:29.3570 |
| 35th | 4 | Takayuki Yamada / Akio Tomita / Masaki Nishihata | Honda S2000 | | 2:29.6090 |
| 36th | 45 | Takeo Asano / Tomoyuki Kasahara / Takao Sakai | Honda Civic | | 2:34.2380 |
| 37th | 55 | Sébastien Philippe / Fabien Giroix / Masahiro Kimoto | Ferrari 550 Maranello | First Racing | 2:11.1820 |
| 38th | 1 | Syunji Kasuya / Takamasa Nakagawa / Masahide Shimizu | Nissan Skyline GT-R (BNR34) | | 2:35.2310 |
| 39th | 47 | Katsuhiko Okamoto / Masato Yamamoto / Satoshi Gotou | Chevrolet Camaro | Advance Auto | no time |