| 1st | 8 | Tomoki Nojiri / Takuya Izawa | Honda NSX-GT (NC1) | Autobacs Racing Team Aguri | 1:44.3190 |
| 2nd | 100 | Naoki Yamamoto / Jenson Button | Honda NSX-GT (NC1) | Team Kunimitsu | 1:44.4730 |
| 3rd | 17 | Koudai Tsukakoshi / Takashi Kogure | Honda NSX-GT (NC1) | Keihin Real Racing | 1:44.8340 |
| 4th | 1 | Ryō Hirakawa / Nick Cassidy | Lexus LC500 (URZ100) | Lexus Team KeePer Tom's | 1:45.1810 |
| 5th | 64 | Kousuke Matsuura / Bertrand Baguette | Honda NSX-GT (NC1) | Epson Nakajima Racing | 1:44.9590 |
| 6th | 12 | Daiki Sasaki / Jann Mardenborough | Nissan GT-R Nismo GT500 (R35) | Team Impul | 1:45.3510 |
| 7th | 16 | Hideki Mutou / Daisuke Nakajima | Honda NSX-GT (NC1) | Team Mugen | 1:45.5720 |
| 8th | 36 | Kazuki Nakajima / Yuuhi Sekiguchi | Lexus LC500 (URZ100) | Lexus Team au Tom's | 1:45.6130 |
| 9th | 19 | Yuuji Kunimoto / Kenta Yamashita | Lexus LC500 (URZ100) | Lexus Team WedsSport Bandoh | 1:45.9340 |
| 10th | 38 | Yuuji Tachikawa / Hiroaki Ishiura | Lexus LC500 (URZ100) | Lexus Team Zent Cerumo | 1:45.9870 |
| 11th | 24 | Joao Paolo de Oliveira / Mitsunori Takaboshi | Nissan GT-R Nismo GT500 (R35) | Kondo Racing | 1:46.0130 |
| 12th | 3 | Satoshi Motoyama / Katsumasa Chiyo | Nissan GT-R Nismo GT500 (R35) | NDDP Racing with B-Max | 1:46.0180 |
| 13th | 39 | Heikki Kovalainen / Kamui Kobayashi | Lexus LC500 (URZ100) | Lexus Team SARD | 1:46.2110 |
| 14th | 6 | Kazuya Oshima / James Rossiter | Lexus LC500 (URZ100) | Lexus Team Le Mans Wako's | 1:46.2870 |
| 15th | 23 | Tsugio Matsuda / Ronnie Quintarelli | Nissan GT-R Nismo GT500 (R35) | NISMO | 1:46.3060 |
| 17th | 96 | Morio Nitta / Yuichi Nakayama | Lexus RC F GT3 (USC10) | K-tunes Racing LM Corsa | 1:55.5310 |
| 18th | 25 | Takamitsu Matsui / Syou Tsuboi | Toyota 86MC (ZN6) | Tsuchiya Engineering | 1:56.1400 |
| 19th | 0 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 (C190) | Goodsmile Racing & Team Ukyo | 1:56.3880 |
| 20th | 61 | Takuto Iguchi / Hideki Yamauchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:56.4330 |
| 21st | 60 | Hiroki Yoshimoto / Ritomo Miyata | Lexus RC F GT3 (USC10) | LM Corsa | 1:56.4610 |
| 22nd | 65 | Haruki Kurosawa / Naoya Gamou | Mercedes-AMG GT3 (C190) | K2 R&D Leon Racing | 1:56.6430 |
| 23rd | 7 | Tomonobu Fujii / Sven Müller | Porsche 991 GT3 R | D'station Racing | 1:56.9670 |
| 24th | 18 | Yuuki Nakayama / Takashi Kobayashi | Toyota 86MC (ZN6) | Team Upgarage | 1:57.0550 |
| 25th | 21 | Richard Lyons / Ryuichiro Tomita | Audi R8 LMS (ABA-4SCSPD) | Audi Team Hitotsuyama | 1:57.0790 |
| 26th | 34 | Ryou Michigami / Hiroki Ootsu | Honda NSX-GT3 (NC1) | Modulo Drago Corse | 1:57.3670 |
| 27th | 10 | Kazuki Hoshino / Hiroki Yoshida | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:57.1570 |
| 28th | 9 | Rintaro Kubo / Keishi Ishikawa | Porsche 991 GT3 R | Pacific with Gulf Racing | 1:57.7080 |
| 29th | 360 | Atsushi Tanaka / Takayuki Aoki | Nissan GT-R Nismo GT3 (R35) | Tomei Sports | 1:58.0630 |
| 30th | 88 | Marco Mapelli / Kazuki Hiramine | Lamborghini Huracán GT3 | JLOC | 1:57.5670 |
| 31st | 26 | Shin'nosuke Yamada / Shintarou Kawabata | Audi R8 LMS (AS4FAFG3) | Team Taisan | 1:58.0950 |
| 32nd | 11 | Katsuyuki Hiranaka / Hironobu Yasuda | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:58.2180 |
| 33rd | 5 | Natsu Sakaguchi / Yuuya Hiraki | Toyota 86MC (ZN6) | Team Mach | 1:58.2230 |
| 34th | 87 | Kimiya Satou / Yuya Motojima | Lamborghini Huracán GT3 | JLOC | 1:58.2280 |
| 35th | 30 | Hiroaki Nagai / Kota Sasaki | Toyota Prius (ZVW51) | Apr | 1:58.2510 |
| 36th | 55 | Shinichi Takagi / Sean Walkinshaw | BMW M6 GT3 (F13) | Autobacs Racing Team Aguri | 1:58.3930 |
| 37th | 31 | Kouki Saga / Kouhei Hirate | Toyota Prius (ZVW51) | Apr | 1:58.5930 |
| 38th | 50 | Masaki Kano / Hideto Yasuoka | Mercedes-AMG GT3 | Arnage Racing | 1:58.6420 |
| 39th | 52 | Taku Bamba / Shigekazu Wakisaka | Toyota Mark X MC (GRX133) | Saitama Toyopet Green Brave | 1:58.8290 |
| 40th | 117 | Yuuji Ide / Ryohei Sakaguchi | Bentley Continental GT3 (BGT3 01) | EIcars Bentley | 1:59.0610 |
| 41st | 777 | Naoki Yokomizo / Takeshi Kimura | Honda NSX-GT3 (NC1) | Carguy Racing | 1:59.2120 |
| 42nd | 48 | Masaki Tanaka / Richard Bradley | Nissan GT-R Nismo GT3 (R35) | Dijon Racing | 2:00.8620 |
| 43rd | 35 | Nattavude Charoensukhawatana / Nattapong Hortongkum | Lexus RC F GT3 (USC10) | Arto-Panther Team Thailand | 2:00.9770 |
| 44th | 22 | Hisashi Wada / Masaki Jounai | Mercedes-AMG GT3 | R'Qs Motor Sports | 2:01.3110 |
| 45th | 2 | Kazuho Takahashi / Hiroki Katou | Lotus Evora MC (122) | Cars Tokai Dream28 | no time |