| 1st | 1 | Bernhard / Webber / Hartley | Porsche 919 Hybrid | Porsche Team | 1:44.307 | 1:44.3070 | 1:45.9350 | 1:44.5940 | 1:45.4180 |
| 2nd | 5 | Davidson / Buemi / Nakajima | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:44.368 | 1:44.3680 | 1:46.7910 | 1:46.8120 | 1:45.6630 |
| 3rd | 8 | di Grassi / Duval / Jarvis | Audi R18 | Audi Sport Team Joest | 1:44.420 | 1:44.4200 | 1:46.1850 | 1:46.2110 | 1:44.5050 |
| 4th | 7 | Lotterer / Fässler / Tréluyer | Audi R18 | Audi Sport Team Joest | 1:44.528 | 1:44.5280 | 1:46.8570 | 1:47.1520 | 1:44.9790 |
| 5th | 2 | Dumas / Jani / Lieb | Porsche 919 Hybrid | Porsche Team | 1:44.596 | 1:44.5960 | 1:46.8470 | 1:46.2640 | 1:44.9130 |
| 6th | 6 | Sarrazin / Conway / Kobayashi | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:44.638 | 1:44.6380 | 1:46.8220 | 1:47.6320 | 1:44.8190 |
| 7th | 13 | Tuscher / Kraihamer / Imperatori | Rebellion R-One AER | Rebellion Racing | 1:49.542 | 1:49.5420 | 1:50.9730 | 1:52.0790 | 1:50.7480 |
| 8th | 4 | Kaffer / Trummer / Webb | CLM P1/01 AER | Bykolles Racing Team | 1:51.235 | 1:51.2350 | 1:53.0650 | 1:51.9110 | 1:51.6020 |
| 9th | 43 | Gonzalez / Albuquerque / Senna | Ligier JS P2 Nissan | RGR Sport by Morand | 1:53.632 | 1:53.6320 | 1:55.7390 | 1:55.2660 | 1:55.4720 |
| 10th | 44 | Rao / Bradley / Lynn | Oreca 05 Nissan | Manor | 1:53.775 | 1:53.7750 | 1:55.4900 | 1:54.8560 | 1:56.6150 |
| 11th | 30 | Giovinazzi / Blomqvist / Gelael | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:53.786 | 1:53.7860 | 1:56.3240 | 1:55.9690 | 1:54.3600 |
| 12th | 36 | Menezes / Lapierre / Richelmi | Alpine A460 Nissan | Signatech Alpine | 1:53.880 | 1:53.8800 | 1:56.3750 | 1:55.5030 | 1:54.3550 |
| 13th | 45 | Graves / Gonzalez / Beche | Oreca 05 Nissan | Manor | 1:54.001 | 1:54.0010 | | 1:55.0280 | 1:56.7420 |
| 14th | 26 | Rusinov / Brundle / Stevens | Oreca 05 Nissan | G-Drive Racing | 1:54.174 | 1:54.1740 | 1:55.7630 | 1:54.6270 | 1:55.6040 |
| 15th | 31 | Dalziel / Derani / Cumming | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:54.773 | 1:54.7730 | 1:56.2240 | 1:55.7270 | 1:55.8650 |
| 16th | 27 | Minassian / Aleshin / Mediani | BR01 Nissan | SMP Racing | 1:55.194 | 1:55.1940 | 1:57.0360 | 1:56.3900 | 1:56.0460 |
| 17th | 35 | Cheng / Tung / Chatin | Alpine A460 Nissan | Baxi DC Racing Alpine | 1:55.422 | 1:55.4220 | 1:57.2110 | 1:56.8890 | 1:55.5590 |
| 18th | 37 | Petrov / Ladygin / Shaytar | BR01 Nissan | SMP Racing | 1:55.832 | 1:55.8320 | 1:57.4190 | 1:56.5300 | 1:56.7030 |
| 19th | 67 | Priaulx / Tincknell | Ford GT | Ford Chip Ganassi Team UK | 2:01.240 | 2:01.2400 | 2:02.2170 | 2:04.3180 | 2:02.5050 |
| 20th | 66 | Mücke / Pla | Ford GT | Ford Chip Ganassi Team UK | 2:01.329 | 2:01.3320 | 2:02.7590 | 2:03.6950 | 2:01.3290 |
| 21st | 95 | Sørensen / Thiim | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:01.854 | 2:01.8540 | 2:03.5100 | 2:04.0960 | 2:02.3930 |
| 22nd | 97 | Stanaway / Turner | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:02.044 | 2:02.4180 | | 2:03.8830 | 2:02.0440 |
| 23rd | 51 | Bruni / Calado | Ferrari 488 GTE | AF Corse | 2:02.313 | 2:02.3130 | 2:02.7640 | 2:02.4810 | 2:03.0470 |
| 24th | 71 | Rigon / Bird | Ferrari 488 GTE | AF Corse | 2:02.403 | 2:02.4030 | 2:03.5630 | 2:02.7410 | 2:02.7280 |
| 25th | 77 | Lietz / Christensen | Porsche 991 RSR (2016) | Dempsey - Proton Racing | 2:03.191 | 2:03.1910 | 2:04.0980 | 2:03.8670 | 2:03.9000 |
| 26th | 98 | Dalla Lana / Lamy / Lauda | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:03.845 | 2:04.0300 | 2:04.7340 | 2:04.5030 | 2:03.8450 |
| 27th | 83 | Perrodo / Collard / Aguas | Ferrari 458 Italia | AF Corse | 2:04.179 | 2:04.3480 | 2:04.9530 | 2:06.1010 | 2:04.1790 |
| 28th | 50 | Ragues / Taylor / Brandela | Chevrolet Corvette C7-Z06 | Larbre Competition | 2:04.326 | 2:06.1150 | 2:05.7320 | 2:06.3030 | 2:04.3260 |
| 29th | 88 | Al Qubaisi / Heinemeier Hansson / Long | Porsche 991 RSR | Abu Dhabi-Proton Racing | 2:04.491 | 2:04.4910 | 2:05.2470 | 2:05.4280 | 2:05.0070 |
| 30th | 86 | Wainwright / Carroll / Barker | Porsche 991 RSR | Gulf Racing | 2:04.849 | 2:04.8490 | 2:05.5550 | 2:05.6020 | 2:05.2240 |
| 31st | 78 | Ried / Henzler / Camathias | Porsche 991 RSR | KCMG | 2:05.251 | 2:06.1880 | 2:05.2510 | 2:05.5610 | 2:06.3580 |