| 17 | Montagny / Hélary / Loeb | Pescarolo C60 Hybrid Judd | Pescarolo Sport | 3:30.1950 | 3:36.3810 | 3:30.1950 |
| 7 | Capello / Kristensen / McNish | Audi R10 TDI | Audi Sport Team Joest | 3:32.0900 | 3:35.0370 | 3:32.0900 |
| 16 | Comas / Collard / Bouchut | Pescarolo C60 Hybrid Judd | Pescarolo Sport | 3:32.2050 | 3:36.5130 | 3:32.2050 |
| 8 | Biela / Pirro / Werner | Audi R10 TDI | Audi Sport Team Joest | 3:33.1600 | 3:35.9270 | 3:33.1600 |
| 13 | Nakano / Kurosawa / Gounon | Courage LC70 Mugen | Courage Competition | 3:33.5110 | 3:38.2070 | 3:33.5110 |
| 14 | Lammers / Yoong / Johansson | Dome S101 HB Judd | Racing for Holland | 3:35.2090 | 3:44.1130 | 3:35.2090 |
| 2 | Nielsen / Elgaard / Andersen | Zytek 06S | Zytek Engineering | 3:36.7740 | 3:40.2230 | 3:36.7740 |
| 9 | Minassian / Ortiz / Gabbiani | Creation CA06/H Judd | Creation Autosportif Ltd. | 3:37.5560 | 3:37.5560 | |
| 19 | Berridge / Evans / Owen | Lola B06/10 AER | Chamberlain - Synergy Motorsport | 3:38.5270 | 3:58.6150 | 3:38.5270 |
| 12 | Hancock / Fisken / Frei | Courage LC70 Mugen | Courage Competition | 3:39.0310 | 3:51.7110 | 3:39.0310 |
| 25 | Newton / Erdos / Wallace | MG Lola EX264 AER | RML | 3:41.8730 | 3:43.8170 | 3:41.8730 |
| 22 | Short / Barbosa / Moseley | Radical SR9 Judd | Rollcentre Racing | 3:43.3730 | 3:57.5050 | 3:43.3730 |
| 33 | Field / Halliday / Dayton | Lola B05/40 AER | Intersport Racing | 3:43.4080 | 3:49.6970 | 3:43.4080 |
| 5 | Primat / Fässler / Peter | Courage LC70 Judd | Swiss Spirit | 3:44.4050 | 3:44.4050 | |
| 37 | André / Clairay / Bouvet | Courage C65 Ford | Paul Belmondo Racing | 3:48.7230 | 3:58.0380 | 3:48.7230 |
| 39 | Amaral / de Castro / Burgueño | Lola B05/40 AER | Chamberlain - Synergy Motorsport | 3:50.0830 | 3:50.0830 | |
| 007 | Enge / Turner / Piccini | Aston Martin DBR9 | Aston Martin Racing | 3:51.4080 | 3:53.3890 | 3:51.4080 |
| 32 | Barazi / Vergers / Cunningham | Courage C65 AER | Barazi Epsilon | 3:52.2870 | 3:52.2870 | |
| 009 | Lamy / Sarrazin / Ortelli | Aston Martin DBR9 | Aston Martin Racing | 3:52.6640 | 3:55.8220 | 3:52.6640 |
| 64 | Gavin / Beretta / Magnussen | Chevrolet Corvette C6.R | Corvette Racing | 3:53.0290 | 3:55.7430 | 3:53.0290 |
| 27 | Macaluso / Lally / James | Courage C65 AER | Miracle Motorsports | 3:53.1640 | 4:04.2900 | 3:53.1640 |
| 63 | Fellows / O'Connell / Papis | Chevrolet Corvette C6.R | Corvette Racing | 3:53.1740 | 3:57.2300 | 3:53.1740 |
| 6 | Moller / Pickering / Kiesa | Lister Storm LMP Hybrid | Lister Storm Racing | 3:54.0990 | 4:02.1920 | 3:54.0990 |
| 72 | Policand / Goueslard / Alphand | Chevrolet Corvette C5-R | Luc Alphand Aventures | 3:54.1130 | 3:55.7950 | 3:54.1130 |
| 20 | Rostan / MacAllister / Pullan | Pilbeam MP93 Judd | Pierre Bruneau | 3:54.4140 | 3:59.7480 | 3:54.4140 |
| 69 | Gollin / Babini / Pescatori | Aston Martin DBR9 | BMS Scuderia Italia | 3:54.5070 | 3:58.1390 | 3:54.5070 |
| 24 | Terada / Timpany / Binnie | Lola B05/40 Zytek | Binnie Motorsports | 3:55.1970 | 4:02.9420 | 3:55.1970 |
| 67 | Pergl / Kox / Vasiliev | Ferrari 550 Maranello | Convers MenX Team | 3:55.3160 | 3:57.0160 | 3:55.3160 |
| 66 | Mowlem / Borcheller / Fittipaldi | Saleen S7-R | ACEMCO Motorsports | 3:56.6950 | 4:02.4000 | 3:56.6950 |
| 36 | Gosselin / Ojjea / Ragues | Courage C65 Ford | Paul Belmondo Racing | 3:57.2540 | 3:58.3630 | 3:57.2540 |
| 50 | Gardel / Bornhauser / Blanchemain | Ferrari 550 Maranello | Larbre Competition | 3:58.5630 | 4:04.2520 | 3:58.5630 |
| 62 | Garcia / Brabham / Piquet, Jr. | Aston Martin DBR9 | Russian Age Racing | 3:58.9350 | 3:58.9350 | |
| 53 | Apicella / Hinoi / Yamanishi | Lamborghini Murcielago R-GT | JLOC Isao Noritake | 3:59.1080 | 4:05.3030 | 3:59.1080 |
| 35 | Hahn / Morris / Leroch | Courage C65 Judd | G-Force Racing | 3:59.1100 | 3:59.1100 | |
| 87 | Kirkaldy / Mullen / Niarchos | Ferrari F430 GTC | Scuderia Ecosse | 4:04.2520 | 4:09.0520 | 4:04.2520 |
| 61 | Sugden / Vann / Smith | Ferrari 550 Maranello | Russian Age Racing | 4:04.7060 | 4:04.7060 | |
| 76 | Narac / Dumas / Riccitelli | Porsche 996 GT3-RSR | IMSA Performance Matmut | 4:04.9140 | 4:07.1530 | 4:04.9140 |
| 80 | Neiman / Long / Van Overbeek | Porsche 996 GT3-RSR | Flying Lizard Motorsports | 4:05.6000 | 4:06.1300 | 4:05.6000 |
| 77 | Maxwell / Jeannette / Milner | Panoz Esperante GT-LM | Multimatic Motorsport - Team Panoz | 4:06.8440 | 4:11.0250 | 4:06.8440 |
| 85 | Bleekemolen / Hezemans / Kane | Spyker C8 Spyder GT2R | Spyker Squadron B.V. | 4:07.3280 | 4:12.6010 | 4:07.3280 |
| 86 | Crevels / Dumbreck / Coronel | Spyker C8 Spyder GT2R | Spyker Squadron B.V. | 4:09.4330 | 4:10.0020 | 4:09.4330 |
| 83 | Nielsen / Farnbacher / Ehret | Porsche 996 GT3-RSR | Seikel Motorsport | 4:09.8460 | 4:15.3520 | 4:09.8460 |
| 89 | Pompidou / Thyrring / Ried | Porsche 996 GT3-RSR | Sebah Automotive Ltd. | 4:10.6360 | 4:10.6360 | |
| 30 | Roussel / Hauchard / Briche | WR LMP2 Peugeot | Gerard Welter | 4:10.6720 | 4:10.6720 | |
| 93 | Collin / Nishizawa | Porsche 996 GT3-RS | Team Taisan Advan | 4:10.8320 | 4:16.1730 | 4:10.8320 |
| 73 | Lambert / Lefort / Iannetta | Porsche 996 GT3-RSR | Ice Pol Racing Team | 4:16.0880 | 4:25.7070 | 4:16.0880 |
| 91 | Yamagishi / Konôpka / de Fournoux | Porsche 996 GT3-RS | T2M Motorsport | 4:16.7480 | 4:23.6580 | 4:16.7480 |
| 98 | Bourdais / Cloet / Sharpe | Porsche 996 GT3-RSR | Noel del Bello | 4:26.8040 | 4:26.8040 | |
| 81 | Tomlinson / Dean / Kimber-Smith | Panoz Esperante GT-LM | Team LNT | 4:33.5690 | 4:33.5690 | |