| 1st | 8 | di Grassi / Duval / Jarvis | Audi R18 | Audi Sport Team Joest | 1:38.7770 | 1:40.6440 | 1:38.7770 |
| 2nd | 7 | Lotterer / Fässler | Audi R18 | Audi Sport Team Joest | 1:39.2390 | 1:39.2390 | 1:39.6490 |
| 3rd | 2 | Dumas / Jani / Lieb | Porsche 919 Hybrid | Porsche Team | 1:39.3090 | 1:40.4770 | 1:39.3090 |
| 4th | 1 | Bernhard / Webber / Hartley | Porsche 919 Hybrid | Porsche Team | 1:39.6780 | 1:40.0440 | 1:39.6780 |
| 5th | 6 | Sarrazin / Conway / Kobayashi | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:40.5710 | 1:40.5710 | 1:40.7070 |
| 6th | 5 | Davidson / Buemi / Nakajima | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:40.6450 | 1:40.6450 | 1:40.8520 |
| 7th | 13 | Tuscher / Kraihamer / Imperatori | Rebellion R-One AER | Rebellion Racing | 1:45.9000 | 1:45.9000 | 1:46.2630 |
| 8th | 4 | Kaffer / Trummer / Webb | CLM P1/01 AER | Bykolles Racing Team | 1:46.6420 | 1:46.6420 | 1:47.1730 |
| 9th | 12 | Prost / Heidfeld / Beche | Rebellion R-One AER | Rebellion Racing | 1:46.9580 | 1:46.9580 | 1:47.0940 |
| 10th | 26 | Rusinov / Rast / Brundle | Oreca 05 Nissan | G-Drive Racing | 1:48.2940 | 1:49.6750 | 1:48.2940 |
| 11th | 43 | Gonzalez / Albuquerque / Senna | Ligier JS P2 Nissan | RGR Sport by Morand | 1:49.2560 | 1:49.2560 | 1:50.9550 |
| 12th | 31 | Dalziel / Derani / Cumming | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:49.5600 | 1:49.5600 | 1:52.8280 |
| 13th | 42 | Leventis / Williamson / Kane | Gibson 015S Nissan | Strakka Racing | 1:49.6000 | 1:49.6000 | 1:49.9240 |
| 14th | 36 | Menezes / Lapierre / Richelmi | Alpine A460 Nissan | Signatech Alpine | 1:49.6430 | 1:49.6430 | 1:49.8120 |
| 15th | 44 | Graves / Pizzonia / Howson | Oreca 05 Nissan | Manor | 1:49.8370 | 1:49.8370 | 1:50.9080 |
| 16th | 35 | Cheng / Panciatici / Tung | Alpine A460 Nissan | Baxi DC Racing Alpine | 1:49.8780 | 1:49.8780 | 1:55.1340 |
| 17th | 45 | Rao / Bradley / Merhi | Oreca 05 Nissan | Manor | 1:50.0310 | 1:50.0310 | 1:52.5570 |
| 18th | 27 | Minassian / Mediani | BR01 Nissan | SMP Racing | 1:50.4100 | 1:50.4100 | 1:51.4860 |
| 19th | 37 | Petrov / Ladygin / Shaytar | BR01 Nissan | SMP Racing | 1:51.3100 | 1:51.3100 | 1:52.0250 |
| 20th | 30 | Sharp / Brown / Van Overbeek | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:51.5710 | 2:01.3530 | 1:51.5710 |
| 21st | 51 | Bruni / Calado | Ferrari 488 GTE | AF Corse | 1:58.5480 | 2:06.4770 | 1:58.5480 |
| 22nd | 95 | Sørensen / Thiim | Aston Martin V8 Vantage GTE | Aston Martin Racing | 1:59.0330 | 1:59.0330 | 2:04.3920 |
| 23rd | 67 | Franchitti / Priaulx / Tincknell | Ford GT | Ford Chip Ganassi Team UK | 2:00.1970 | 2:06.3160 | 2:00.1970 |
| 24th | 97 | Stanaway / Turner | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:00.2150 | 2:00.2150 | 2:04.2250 |
| 25th | 77 | Lietz / Christensen | Porsche 991 RSR (2016) | Dempsey-Proton Racing | 2:00.5770 | 2:06.7850 | 2:00.5770 |
| 26th | 66 | Mücke / Pla | Ford GT | Ford Chip Ganassi Team UK | 2:01.0340 | 2:01.0340 | 2:02.8840 |
| 27th | 83 | Perrodo / Collard / Aguas | Ferrari 458 Italia | AF Corse | 2:01.6440 | 2:01.6440 | 2:11.5350 |
| 28th | 88 | Al Qubaisi / Heinemeier Hansson / Long | Porsche 991 RSR | Abu Dhabi-Proton Racing | 2:01.8440 | 2:10.1790 | 2:01.8440 |
| 29th | 78 | Ried / Henzler / Camathias | Porsche 991 RSR | KCMG | 2:02.2370 | 2:10.1570 | 2:02.2370 |
| 30th | 98 | Dalla Lana / Lamy / Lauda | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:05.7320 | 2:07.0130 | 2:05.7320 |
| 31st | 71 | Rigon / Bird | Ferrari 488 GTE | AF Corse | 2:06.3710 | 2:06.3710 | 2:07.1200 |
| 32nd | 50 | Yamagishi / Ragues / Ruberti | Chevrolet Corvette C7-Z06 | Larbre Competition | 2:07.1840 | 2:07.1840 | 2:11.0710 |
| 33rd | 86 | Wainwright / Carroll / Barker | Porsche 991 RSR | Gulf Racing | 2:08.3650 | 2:08.3650 | 2:11.2750 |