| 1st | 1 | Bernhard / Webber / Hartley | Porsche 919 Hybrid | Porsche Team | 1:44.3070 | 1:44.6180 | 1:44.3070 |
| 2nd | 5 | Davidson / Buemi / Nakajima | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:44.3680 | 1:44.3680 | 1:44.6770 |
| 3rd | 8 | di Grassi / Duval / Jarvis | Audi R18 | Audi Sport Team Joest | 1:44.4200 | 1:44.4200 | 1:44.8000 |
| 4th | 7 | Lotterer / Fässler / Tréluyer | Audi R18 | Audi Sport Team Joest | 1:44.5280 | 1:45.2090 | 1:44.5280 |
| 5th | 2 | Dumas / Jani / Lieb | Porsche 919 Hybrid | Porsche Team | 1:44.5960 | 1:44.5960 | 1:45.5070 |
| 6th | 6 | Sarrazin / Conway / Kobayashi | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:44.6380 | 1:44.9830 | 1:44.6380 |
| 7th | 13 | Tuscher / Kraihamer / Imperatori | Rebellion R-One AER | Rebellion Racing | 1:49.5420 | 1:50.1150 | 1:49.5420 |
| 8th | 4 | Kaffer / Trummer / Webb | CLM P1/01 AER | Bykolles Racing Team | 1:51.2350 | 1:51.3350 | 1:51.2350 |
| 9th | 43 | Gonzalez / Albuquerque / Senna | Ligier JS P2 Nissan | RGR Sport by Morand | 1:53.6320 | 1:56.0590 | 1:53.6320 |
| 10th | 44 | Rao / Bradley / Lynn | Oreca 05 Nissan | Manor | 1:53.7750 | 1:54.6760 | 1:53.7750 |
| 11th | 30 | Giovinazzi / Blomqvist / Gelael | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:53.7860 | 1:55.0100 | 1:53.7860 |
| 12th | 36 | Menezes / Lapierre / Richelmi | Alpine A460 Nissan | Signatech Alpine | 1:53.8800 | 1:53.8800 | 1:54.8840 |
| 13th | 45 | Graves / Gonzalez / Beche | Oreca 05 Nissan | Manor | 1:54.0010 | 1:54.0010 | 1:55.7970 |
| 14th | 26 | Rusinov / Brundle / Stevens | Oreca 05 Nissan | G-Drive Racing | 1:54.1740 | 1:54.1740 | 1:55.3450 |
| 15th | 31 | Dalziel / Derani / Cumming | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:54.7730 | 1:54.7730 | 1:58.1050 |
| 16th | 27 | Minassian / Aleshin / Mediani | BR01 Nissan | SMP Racing | 1:55.1940 | 1:56.3140 | 1:55.1940 |
| 17th | 35 | Cheng / Tung / Chatin | Alpine A460 Nissan | Baxi DC Racing Alpine | 1:55.4220 | 1:58.8000 | 1:55.4220 |
| 18th | 37 | Petrov / Ladygin / Shaytar | BR01 Nissan | SMP Racing | 1:55.8320 | 1:57.0260 | 1:55.8320 |
| 19th | 67 | Priaulx / Tincknell | Ford GT | Ford Chip Ganassi Team UK | 2:01.2400 | 2:01.5430 | 2:01.2400 |
| 20th | 66 | Mücke / Pla | Ford GT | Ford Chip Ganassi Team UK | 2:01.3320 | 2:01.7250 | 2:01.3320 |
| 21st | 95 | Sørensen / Thiim | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:01.8540 | 2:02.2260 | 2:01.8540 |
| 22nd | 51 | Bruni / Calado | Ferrari 488 GTE | AF Corse | 2:02.3130 | 2:02.3130 | 2:02.3180 |
| 23rd | 71 | Rigon / Bird | Ferrari 488 GTE | AF Corse | 2:02.4030 | 2:02.4030 | 2:03.3290 |
| 24th | 97 | Stanaway / Turner | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:02.4180 | 2:02.4460 | 2:02.4180 |
| 25th | 77 | Lietz / Christensen | Porsche 991 RSR (2016) | Dempsey - Proton Racing | 2:03.1910 | 2:03.1910 | 2:04.3430 |
| 26th | 98 | Dalla Lana / Lamy / Lauda | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:04.0300 | 2:04.0300 | 2:05.9650 |
| 27th | 83 | Perrodo / Collard / Aguas | Ferrari 458 Italia | AF Corse | 2:04.3480 | 2:04.3480 | 2:06.3210 |
| 28th | 88 | Al Qubaisi / Heinemeier Hansson / Long | Porsche 991 RSR | Abu Dhabi-Proton Racing | 2:04.4910 | 2:04.4910 | 2:06.4420 |
| 29th | 86 | Wainwright / Carroll / Barker | Porsche 991 RSR | Gulf Racing | 2:04.8490 | 2:04.8490 | 2:10.5760 |
| 30th | 50 | Ragues / Taylor / Brandela | Chevrolet Corvette C7-Z06 | Larbre Competition | 2:06.1150 | 2:06.1150 | 2:09.6000 |
| 31st | 78 | Ried / Henzler / Camathias | Porsche 991 RSR | KCMG | 2:06.1880 | 2:06.1880 | 2:06.5000 |