| 1st | 23 | Tsugio Matsuda / Ronnie Quintarelli | Nissan GT-R Nismo GT500 (R35) | NISMO | 1:29.0060 |
| 2nd | 3 | Satoshi Motoyama / Katsumasa Chiyo | Nissan GT-R Nismo GT500 (R35) | NDDP Racing with B-Max | 1:29.0760 |
| 3rd | 36 | Kazuki Nakajima / Yuuhi Sekiguchi | Lexus LC500 (URZ100) | Lexus Team au Tom's | 1:29.1320 |
| 4th | 19 | Yuuji Kunimoto / Kenta Yamashita | Lexus LC500 (URZ100) | Lexus Team WedsSport Bandoh | 1:29.1520 |
| 5th | 24 | Joao Paolo de Oliveira / Mitsunori Takaboshi | Nissan GT-R Nismo GT500 (R35) | Kondo Racing | 1:29.2210 |
| 6th | 12 | Daiki Sasaki / Jann Mardenborough | Nissan GT-R Nismo GT500 (R35) | Team Impul | 1:29.2980 |
| 7th | 8 | Tomoki Nojiri / Takuya Izawa | Honda NSX-GT (NC1) | Autobacs Racing Team Aguri | 1:29.3550 |
| 8th | 1 | Ryō Hirakawa / Nick Cassidy | Lexus LC500 (URZ100) | Lexus Team KeePer Tom's | 1:29.3780 |
| 9th | 100 | Naoki Yamamoto / Jenson Button | Honda NSX-GT (NC1) | Team Kunimitsu | 1:29.4640 |
| 10th | 64 | Kousuke Matsuura / Bertrand Baguette | Honda NSX-GT (NC1) | Epson Nakajima Racing | 1:29.4820 |
| 11th | 39 | Heikki Kovalainen / Kamui Kobayashi | Lexus LC500 (URZ100) | Lexus Team SARD | 1:29.6700 |
| 12th | 16 | Hideki Mutou / Daisuke Nakajima | Honda NSX-GT (NC1) | Team Mugen | 1:29.6830 |
| 13th | 6 | Kazuya Oshima / Felix Rosenqvist | Lexus LC500 (URZ100) | Lexus Team Le Mans Wako's | 1:30.0330 |
| 14th | 2 | Kazuho Takahashi / Hiroki Katou | Lotus Evora MC (122) | Cars Tokai Dream28 | 1:38.0300 |
| 15th | 25 | Takamitsu Matsui / Syou Tsuboi / Tsubasa Kondo | Toyota 86MC (ZN6) | Tsuchiya Engineering | 1:38.0890 |
| 17th | 10 | Kazuki Hoshino / Hiroki Yoshida | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:38.1220 |
| 18th | 55 | Shinichi Takagi / Sean Walkinshaw | BMW M6 GT3 (F13) | Autobacs Racing Team Aguri | 1:38.1430 |
| 19th | 31 | Kouki Saga / Kouhei Hirate | Toyota Prius (ZVW51) | Apr | 1:38.2320 |
| 20th | 65 | Haruki Kurosawa / Naoya Gamou | Mercedes-AMG GT3 (C190) | K2 R&D Leon Racing | 1:38.2470 |
| 21st | 0 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 (C190) | Goodsmile Racing & Team Ukyo | 1:38.3130 |
| 22nd | 5 | Natsu Sakaguchi / Yuuya Hiraki / Kiyoto Fujinami | Toyota 86MC (ZN6) | Team Mach | 1:38.3200 |
| 23rd | 11 | Katsuyuki Hiranaka / Hironobu Yasuda | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:38.3420 |
| 24th | 777 | Naoki Yokomizo / Takeshi Kimura | Honda NSX-GT3 (NC1) | Carguy Racing | 1:38.3640 |
| 25th | 61 | Takuto Iguchi / Hideki Yamauchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:38.3690 |
| 26th | 18 | Yuuki Nakayama / Takashi Kobayashi | Toyota 86MC (ZN6) | Team Upgarage | 1:38.4080 |
| 27th | 7 | Tomonobu Fujii / Sven Müller | Porsche 991 GT3 R | D'station Racing | 1:38.4600 |
| 28th | 21 | Richard Lyons / Ryuichiro Tomita / Takuro Shinohara | Audi R8 LMS (ABA-4SCSPD) | Audi Team Hitotsuyama | 1:38.5490 |
| 29th | 26 | Shin'nosuke Yamada / Shintarou Kawabata / Shinji Nakano | Audi R8 LMS (AS4FAFG3) | Team Taisan | 1:38.5890 |
| 30th | 87 | Kimiya Satou / Yuya Motojima / Tsubasa Takahashi | Lamborghini Huracán GT3 | JLOC | 1:38.6090 |
| 31st | 96 | Morio Nitta / Yuichi Nakayama | Lexus RC F GT3 (USC10) | K-tunes Racing LM Corsa | 1:38.6840 |
| 32nd | 52 | Taku Bamba / Shigekazu Wakisaka | Toyota Mark X MC (GRX133) | Saitama Toyopet Green Brave | 1:38.8100 |
| 33rd | 360 | Yuusaku Shibata / Takayuki Aoki / Masataka Yanagida | Nissan GT-R Nismo GT3 (R35) | Tomei Sports | 1:38.9510 |
| 34th | 50 | Masaki Kano / Hideto Yasuoka / Yuuya Sakamoto | Mercedes-AMG GT3 | Arnage Racing | 1:39.2280 |
| 35th | 117 | Yuuji Ide / Ryohei Sakaguchi / Jules Gounon | Bentley Continental GT3 (BGT3 01) | EIcars Bentley | 1:39.2700 |
| 36th | 30 | Hiroaki Nagai / Kota Sasaki / Manabu Orido | Toyota Prius (ZVW51) | Apr | 1:39.2700 |
| 37th | 60 | Hiroki Yoshimoto / Ritomo Miyata | Lexus RC F GT3 (USC10) | LM Corsa | 1:39.3810 |
| 38th | 48 | Masaki Tanaka / Taiyo Iida / Richard Bradley | Nissan GT-R Nismo GT3 (R35) | Dijon Racing | 1:39.8450 |
| 39th | 35 | Nattavude Charoensukhawatana / Nattapong Hortongkum / Kouji Yamanishi | Lexus RC F GT3 (USC10) | Arto-Panther Team Thailand | 1:39.9720 |
| 40th | 9 | Rintaro Kubo / Keishi Ishikawa / Kyousuke Mineo | Porsche 991 GT3 R | Pacific with Gulf Racing | 1:40.1230 |
| 41st | 22 | Hisashi Wada / Masaki Jounai / Masayuki Ueda | Mercedes-AMG GT3 | R'Qs Motor Sports | 1:40.6160 |
| 42nd | 88 | Kazuki Hiramine / Marco Mapelli | Lamborghini Huracán GT3 | JLOC | 1:46.0370 |