| 1st | 38 | Yuuji Tachikawa / Hiroaki Ishiura | Lexus LC500 (URZ100) | Lexus Team Zent Cerumo | 1:18.5210 |
| 2nd | 6 | Kazuya Oshima / Andrea Caldarelli | Lexus LC500 (URZ100) | Lexus Team Le Mans Wako's | 1:18.5580 |
| 3rd | 37 | Ryo Hirakawa / Nick Cassidy | Lexus LC500 (URZ100) | Lexus Team KeePer Tom's | 1:18.5840 |
| 4th | 19 | Yuuhi Sekiguchi / Yuuji Kunimoto | Lexus LC500 (URZ100) | Lexus Team WedsSport Bandoh | 1:18.5910 |
| 5th | 8 | Tomoki Nojiri / Takashi Kobayashi | Honda NSX-GT (NC1) | Autobacs Racing Team Aguri | 1:18.6200 |
| 6th | 17 | Koudai Tsukakoshi / Takashi Kogure | Honda NSX-GT (NC1) | Keihin Real Racing | 1:18.6480 |
| 7th | 16 | Hideki Mutou / Daisuke Nakajima | Honda NSX-GT (NC1) | Team Mugen | 1:18.8460 |
| 8th | 36 | Kazuki Nakajima / James Rossiter | Lexus LC500 (URZ100) | Lexus Team au Tom's | 1:18.9750 |
| 9th | 1 | Heikki Kovalainen / Kouhei Hirate | Lexus LC500 (URZ100) | Lexus Team SARD | 1:19.0720 |
| 10th | 100 | Naoki Yamamoto / Takuya Izawa | Honda NSX-GT (NC1) | Team Kunimitsu | 1:19.0890 |
| 11th | 24 | Daiki Sasaki / Joao Paolo de Oliveira | Nissan GT-R Nismo GT500 (R35) | Kondo Racing | 1:19.2340 |
| 12th | 64 | Kousuke Matsuura / Bertrand Baguette | Honda NSX-GT (NC1) | Nakajima Racing | 1:19.2690 |
| 13th | 12 | Hironobu Yasuda / Jann Mardenborough | Nissan GT-R Nismo GT500 (R35) | Team Impul | 1:19.3150 |
| 14th | 23 | Tsugio Matsuda / Ronnie Quintarelli | Nissan GT-R Nismo GT500 (R35) | NISMO | 1:19.3860 |
| 15th | 46 | Satoshi Motoyama / Katsumasa Chiyo | Nissan GT-R Nismo GT500 (R35) | Mola | 1:19.6160 |
| 17th | 4 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 (C190) | Goodsmile Racing & Team Ukyo | 1:25.8250 |
| 18th | 2 | Kazuho Takahashi / Hiroki Katou | Lotus Evora MC (122) | Cars Tokai Dream28 | 1:26.1700 |
| 19th | 30 | Hiroaki Nagai / Kota Sasaki | Toyota Prius (ZVW51) | Apr | 1:26.2070 |
| 20th | 65 | Haruki Kurosawa / Naoya Gamou | Mercedes-AMG GT3 (C190) | K2 R&D Leon Racing | 1:26.2540 |
| 21st | 25 | Takamitsu Matsui / Kenta Yamashita | Toyota 86 MC (ZN6) | Vivac Team Tsuchiya | 1:26.3620 |
| 22nd | 51 | Yuichi Nakayama / Syou Tsuboi | Lexus RC F GT3 (USC10) | LM Corsa | 1:26.3740 |
| 23rd | 87 | Shin'ya Hosokawa / Kimiya Satou | Lamborghini Huracán GT3 | JLOC | 1:26.5520 |
| 24th | 11 | Katsuyuki Hiranaka / Björn Wirdheim | Mercedes-AMG GT3 (C190) | Gainer | 1:26.5940 |
| 25th | 31 | Kouki Saga / Rintaro Kubo | Toyota Prius (ZVW51) | Apr | 1:26.6310 |
| 26th | 88 | Manabu Orido / Kazuki Hiramine | Lamborghini Huracán GT3 | JLOC | 1:26.7230 |
| 27th | 50 | Akihiro Tsuduki / Morio Nitta | Ferrari 488 GT3 (F142M) | Inging & Arnage Racing | 1:26.8030 |
| 28th | 21 | Richard Lyons / Masataka Yanagida | Audi R8 LMS (ABA-4SCSPD) | Audi Team Hitotsuyama | 1:26.8380 |
| 29th | 61 | Takuto Iguchi / Hideki Yamauchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:26.8980 |
| 30th | 10 | Ryuichiro Tomita / Hiroki Yoshida | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:26.9410 |
| 31st | 9 | Jono Lester / Kyousuke Mineo | Porsche 991 GT3 R | Pacific with Gulf Racing | 1:26.9550 |
| 32nd | 3 | Kazuki Hoshino / Mitsunori Takaboshi | Nissan GT-R Nismo GT3 (R35) | NDDP Racing | 1:27.0020 |
| 33rd | 5 | Natsu Sakaguchi / Kiyoto Fujinami | Toyota 86 MC (ZN6) | Team Mach | 1:27.0060 |
| 34th | 55 | Shinichi Takagi / Sean Walkinshaw | BMW M6 GT3 (F13) | Autobacs Racing Team Aguri | 1:27.0540 |
| 35th | 33 | Tomonobu Fujii / Sven Müller | Porsche 991 GT3 R | D'station Racing | 1:27.0960 |
| 36th | 18 | Yuuki Nakayama / Shintarou Kawabata | Toyota 86 MC (ZN6) | Team Upgarage With Bandoh | 1:27.1590 |
| 37th | 111 | Keishi Ishikawa / Ryousei Yamashita | Mercedes-AMG GT3 (C190) | Rn-sports | 1:27.2520 |
| 38th | 60 | Akira Iida / Hiroki Yoshimoto | Lexus RC F GT3 (USC10) | LM Corsa | 1:27.4610 |
| 39th | 117 | Yuuji Ide / Ryohei Sakaguchi | Bentley Continental GT3 (BGT3 01) | EIcars Bentley TTO | 1:27.5860 |
| 40th | 360 | Yuusaku Shibata / Takayuki Aoki | Nissan GT-R Nismo GT3 (R35) | Tomei Sports | 1:27.7460 |
| 41st | 26 | Shin'nosuke Yamada / Jake Parsons | Audi R8 LMS (AS4FAFG3) | Team Taisan SARD | 1:28.1860 |
| 42nd | 22 | Hisashi Wada / Masaki Jounai | Mercedes-Benz SLS AMG GT3 | R'Qs Motor Sports | 1:28.4850 |
| 43rd | 48 | Hiroshi Takamori / Masaki Tanaka | Nissan GT-R Nismo GT3 (R35) | Dijon Racing | 1:28.5850 |
| 44th | 35 | Nattavude Charoensukhawatana / Nattapong Hortongkum | Toyota 86 MC (ZN6) | Panther Team Thailand | 1:29.1570 |