| 1st | 32 | Loïc Duval / Fabio Carbone | Honda NSX (LA-NA2) | Nakajima Racing | 1:53.1100 |
| 1st | 13 | Masami Kageyama / Tomonobu Fujii | Nissan Fairlady Z (Z33) | Endless Sports | 2:04.3840 |
| 2nd | 38 | Yuuji Tachikawa / Toranosuke Takagi | Lexus SC430 (UZZ40) | Toyota Team Cerumo | 1:53.6240 |
| 2nd | 46 | Kota Sasaki / Naoki Yokomizo | Nissan Fairlady Z (Z33) | Mola | 2:04.6360 |
| 3rd | 23 | Satoshi Motoyama / Richard Lyons | Nissan Fairlady Z (Z33) | Nismo | 1:53.6310 |
| 3rd | 43 | Morio Nitta / Shinichi Takagi | ASL Garaiya | Autobacs Racing Team Aguri | 2:05.1430 |
| 4th | 1 | Juichi Wakisaka / Andre Lotterer | Lexus SC430 (UZZ40) | Toyota Team Tom's | 1:53.8990 |
| 4th | 7 | Hiroyuki Iiri | Mazda RX-7 (FD3S) | RE Amemiya Racing | 2:05.3010 |
| 5th | 18 | Ryou Michigami / Takashi Kogure | Honda NSX (LA-NA2) | Dome Racing Team | 1:53.9140 |
| 5th | 62 | Shinsuke Shibahara / Haruki Kurosawa | Vemac RD408R | Willcom R&D Sport | 2:05.3970 |
| 6th | 22 | Michael Krumm / Tsugio Matsuda | Nissan Fairlady Z (Z33) | Nismo | 1:54.0060 |
| 6th | 88 | | Lamborghini Murcielago RG-1 (GH-BC10E) | JLOC | 2:05.7490 |
| 7th | 8 | Daisuke Itou / Ralph Firman | Honda NSX (LA-NA2) | Autobacs Racing Team Aguri | 1:54.0330 |
| 7th | 666 | Syougo Suhou / Jun'ichirou Yamashita | Vemac RD320R | Avanzza x Bomex | 2:05.7920 |
| 8th | 17 | Katsutomo Kaneishi / Toshihiro Kaneishi | Honda NSX (LA-NA2) | Rolling Stone Real Racing | 1:54.1230 |
| 8th | 2 | Kazuho Takahashi / Hiroki Katou | Shiden MC/RT-16 | Cars Tokai Dream28 | 2:05.8070 |
| 9th | 100 | Shin'ya Hosokawa / Dominik Schwager | Honda NSX (LA-NA2) | Team Kunimitsu | 1:54.1990 |
| 9th | 4 | Tetsuya Tanaka / Shinsuke Yamazaki | Vemac RD350R | Ebbro Team Nova | 2:06.2120 |
| 10th | 350 | | Nissan Fairlady Z (Z33) | Nismo | 1:54.3680 |
| 10th | 19 | | Toyota Celica (ZZT231) | Racing Project Bandoh | 2:06.2780 |
| 11th | 6 | Tatsuya Kataoka / Björn Wirdheim | Lexus SC430 (UZZ40) | Forum Eng. Toyota Team Le Mans | 1:54.6390 |
| 11th | 47 | Shigekazu Wakisaka / Shogo Mitsuyama | Nissan Fairlady Z (Z33) | Mola | 2:06.3780 |
| 12th | 12 | Benoit Tréluyer / Kazuki Hoshino | Nissan Fairlady Z (Z33) | Team Impul | 1:55.0390 |
| 12th | 26 | Shin'ichi Yamaji / Nobuteru Taniguchi | Porsche 996 GT3-RS | Team Taisan With Nishizawa | 2:06.5730 |
| 13th | 3 | Sébastien Philippe / Masataka Yanagida | Nissan Fairlady Z (Z33) | Hasemi Motorsport | 1:55.2100 |
| 13th | 77 | Tetsuya Yamano / Takayuki Aoki | Subaru Impreza (GD) | Cusco Racing | 2:07.3340 |
| 14th | 35 | Naoki Hattori / Peter Dumbreck | Lexus SC430 (UZZ40) | Toyota Team Kraft | 1:55.5470 |
| 14th | 5 | Tetsuji Tamanaka / Hironori Takeuchi | Vemac RD320R | Team Mach | 2:07.7040 |
| 15th | 39 | André Couto / Katsuyuki Hiranaka | Lexus SC430 (UZZ40) | Toyota Team Sard | 1:55.6250 |
| 15th | 31 | Kazuya Oshima / Hiroaki Ishiura | Toyota MR-S (GH-ZZW30) | Apr | 2:07.7110 |
| 16th | 25 | Takeshi Tsuchiya / Manabu Orido | Lexus SC430 (UZZ40) | Toyota Team Tsuchiya | 1:56.1620 |
| 16th | 83 | Tadao Uematsu / Ryohei Sakaguchi | Vemac RD320R | Yokoyama Racing | 2:07.8830 |
| 17th | 24 | Joao Paolo de Oliveira / Seiji Ara | Nissan Fairlady Z (Z33) | Kondo Racing | 1:56.2910 |
| 17th | 110 | Takuya Kurosawa | Porsche 986 Boxster | Arktech Motorsports | 2:08.2300 |
| 18th | 118 | Takshi Miyamoto / Syouzou Tagahara | Porsche 996 GT3-RS | Tomei Sports | 2:12.7430 |