| 1st | 7 | Andre Lotterer / Marcel Fässler / Benoit Tréluyer | Audi R18 | Audi Sport Team Joest | 1:45.7030 |
| 2nd | 8 | Lucas di Grassi / Loic Duval / Oliver Jarvis | Audi R18 | Audi Sport Team Joest | 1:46.0820 |
| 3rd | 1 | Timo Bernhard / Mark Webber / Brendon Hartley | Porsche 919 Hybrid | Porsche Team | 1:46.5930 |
| 4th | 6 | Stéphane Sarrazin / Mike Conway / Kamui Kobayashi | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:47.4840 |
| 5th | 2 | Romain Dumas / Neel Jani / Marc Lieb | Porsche 919 Hybrid | Porsche Team | 1:48.5910 |
| 6th | 5 | Anthony Davidson / Sébastien Buemi / Kazuki Nakajima | Toyota TS050 Hybrid | Toyota Gazoo Racing | 1:50.0910 |
| 7th | 13 | Mathéo Tuscher / Dominik Kraihamer / Alexandre Imperatori | Rebellion R-One AER | Rebellion Racing | 1:53.6420 |
| 8th | 4 | Simon Trummer / Oliver Webb | CLM P1/01 AER | Bykolles Racing Team | 1:54.0690 |
| 9th | 36 | Gustavo Menezes / Nicolas Lapierre / Stéphane Richelmi | Alpine A460 Nissan | Signatech Alpine | 1:55.6450 |
| 10th | 35 | David Cheng / Nelson Panciatici / Ho-Pin Tung | Alpine A460 Nissan | Baxi DC Racing Alpine | 1:56.6870 |
| 11th | 42 | Nick Leventis / Lewis Williamson / Jonny Kane | Gibson 015S Nissan | Strakka Racing | 1:57.1580 |
| 12th | 30 | Scott Sharp / Ed Brown / Johannes Van Overbeek | Ligier JS P2 Nissan | Extreme Speed Motorsports | 1:57.2270 |
| 13th | 44 | Matthew Rao / Richard Bradley / Roberto Merhi | Oreca 05 Nissan | Manor | 1:57.5510 |
| 14th | 37 | Vitaly Petrov / Kirill Ladygin / Victor Shaytar | BR01 Nissan | SMP Racing | 1:57.7190 |
| 15th | 43 | Ricardo Gonzalez / Filipe Albuquerque / Bruno Senna | Ligier JS P2 Nissan | RGR Sport by Morand | 1:58.9800 |
| 16th | 27 | Nicolas Minassian / Maurizio Mediani | BR01 Nissan | SMP Racing | 1:59.0770 |
| 17th | 31 | Ryan Dalziel / Pipo Derani / Chris Cumming | Ligier JS P2 Nissan | Extreme Speed Motorsports | 2:00.0290 |
| 18th | 95 | Marco Sørensen / Nicki Thiim | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:04.6410 |
| 19th | 97 | Darren Turner / Fernando Rees | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:04.6950 |
| 20th | 71 | Davide Rigon / Sam Bird | Ferrari 488 GTE | AF Corse | 2:04.7560 |
| 21st | 66 | Stefan Mücke / Olivier Pla | Ford GT | Ford Chip Ganassi Team UK | 2:05.0510 |
| 22nd | 51 | Gianmaria Bruni / James Calado | Ferrari 488 GTE | AF Corse | 2:05.1180 |
| 23rd | 67 | Marino Franchitti / Andy Priaulx / Harry Tincknell | Ford GT | Ford Chip Ganassi Team UK | 2:05.2130 |
| 24th | 77 | Richard Lietz / Michael Christensen | Porsche 991 RSR (2016) | Dempsey - Proton Racing | 2:06.5930 |
| 25th | 98 | Paul Dalla Lana / Pedro Lamy / Mathias Lauda | Aston Martin V8 Vantage GTE | Aston Martin Racing | 2:08.3680 |
| 26th | 78 | Christian Ried / Wolf Henzler / Joël Camathias | Porsche 991 RSR | KCMG | 2:09.2700 |
| 27th | 88 | Khaled Al Qubaisi / David Heinemeier Hansson / Kevin Estre | Porsche 991 RSR | Abu Dhabi-Proton Racing | 2:09.3090 |
| 28th | 83 | François Perrodo / Emmanuel Collard / Rui Aguas | Ferrari 458 Italia | AF Corse | 2:09.7990 |
| 29th | 86 | Mike Wainwright / Adam Carroll / Ben Barker | Porsche 991 RSR | Gulf Racing | 2:11.1780 |
| 30th | 50 | Lars Viljoen / Pierre Ragues / Ricky Taylor | Chevrolet Corvette C7-Z06 | Larbre Competition | 2:11.3940 |