| 12 | Joao Paolo de Oliveira / Hironobu Yasuda | Nissan GT-R Nismo GT500 (R35) | Team Impul | 1:28.4580 |
| 46 | Satoshi Motoyama / Katsumasa Chiyo | Nissan GT-R Nismo GT500 (R35) | Mola | 1:28.9340 |
| 1 | Tsugio Matsuda / Ronnie Quintarelli | Nissan GT-R Nismo GT500 (R35) | NISMO | 1:28.9970 |
| 17 | Koudai Tsukakoshi / Takashi Kogure | Honda NSX Concept-GT (NSX-P) | Keihin Real Racing | 1:29.2510 |
| 15 | Hideki Mutou / Oliver Turvey | Honda NSX Concept-GT (NSX-P) | Drago Modulo Honda Racing | 1:29.2640 |
| 24 | Daiki Sasaki / Masataka Yanagida | Nissan GT-R Nismo GT500 (R35) | Kondo Racing | 1:29.6640 |
| 100 | Naoki Yamamoto / Takuya Izawa | Honda NSX Concept-GT (NSX-P) | Team Kunimitsu | 1:29.7400 |
| 19 | Yuuhi Sekiguchi / Yuuji Kunimoto | Lexus RC F (USC10) | Lexus Team WedsSport Bandoh | 1:29.9650 |
| 55 | Shinichi Takagi / Takashi Kobayashi | BMW M6 GT3 (F13) | Autobacs Racing Team Aguri | 1:37.5450 |
| 21 | Richard Lyons / Tomonobu Fujii | Audi R8 LMS | Audi Team Hitotsuyama | 1:37.8890 |
| 51 | Akihiro Tsuduki / Morio Nitta | Ferrari 488 GT3 | LM Corsa | 1:37.9080 |
| 61 | Takuto Iguchi / Hideki Yamauchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:37.9790 |
| 4 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 | Goodsmile Racing & Team Ukyo | 1:38.1450 |
| 31 | Kouki Saga / Yuichi Nakayama | Toyota Prius (ZVW50) | Apr | 1:38.1720 |
| 65 | Haruki Kurosawa / Naoya Gamou | Mercedes-AMG GT3 (197) | K2 R&D Leon Racing | 1:38.5340 |
| 88 | Manabu Orido / Kazuki Hiramine | Lamborghini Huracán GT3 | JLOC | 1:38.6380 |
| 25 | Takeshi Tsuchiya / Takamitsu Matsui | Toyota 86 MC (MC86) | Vivac Team Tsuchiya | 1:38.7700 |
| 63 | Adrian Zaugg / Naoki Yokomizo | Lamborghini Huracán GT3 | Lamboghini Team Direction | 1:38.8040 |
| 11 | Katsuyuki Hiranaka / Björn Wirdheim | Mercedes-AMG GT3 | Gainer | 1:39.2330 |
| 26 | Shogo Mitsuyama / Yuya Motojima | Audi R8 LMS Ultra | Team Taisan SARD | 1:39.4180 |
| 30 | Hiroaki Nagai / Kota Sasaki | Toyota Prius (ZVW50) | Apr | 1:39.5290 |
| 2 | Kazuho Takahashi / Hiroki Katou | Lotus Evora MC (122) | Cars Tokai Dream28 | 1:39.9900 |