| 23 | Tsugio Matsuda / Ronnie Quintarelli | Nissan GT-R (R35) | NISMO | 1:28.5190 |
| 3 | Kouhei Hirate / Frédéric Makowiecki | Nissan GT-R (R35) | NDDP Racing with B-Max | 1:28.6490 |
| 19 | Yuuji Kunimoto / Syou Tsuboi | Lexus LC500 (URZ100) | Lexus Team WedsSport Bandoh | 1:28.8450 |
| 38 | Yuuji Tachikawa / Hiroaki Ishiura | Lexus LC500 (URZ100) | Lexus Team Zent Cerumo | 1:29.1560 |
| 36 | Kazuki Nakajima / Yuuhi Sekiguchi | Lexus LC500 (URZ100) | Lexus Team au Tom's | 1:29.2930 |
| 24 | Mitsunori Takaboshi / Jann Mardenborough | Nissan GT-R (R35) | Kondo Racing | 1:29.3350 |
| 64 | Narain Karthikeyan / Tadasuke Makino | Honda NSX-GT (NC1) | Modulo Nakajima Racing | 1:31.6730 |
| 52 | Shigekazu Wakisaka / Hiroki Yoshida | Toyota Mark X (GRX133) | Saitama Toyopet Green Brave | 1:37.3160 |
| 25 | Takamitsu Matsui / Kimiya Satou / Takeshi Tsuchiya | Toyota 86MC (ZN6) | Tsuchiya Engineering | 1:37.3940 |
| 360 | Takayuki Aoki / Atsushi Tanaka / Yuusaku Shibata | Nissan GT-R Nismo GT3 (R35) | Tomei Sports | 1:37.4540 |
| 61 | Takuto Iguchi / Hideki Yamauchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:37.6520 |
| 10 | Kazuki Hoshino / Keishi Ishikawa | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:37.7240 |
| 56 | Kazuki Hiramine / Sacha Fenestraz | Nissan GT-R Nismo GT3 (R35) | Kondo Racing | 1:37.7350 |
| 33 | Shaun Thong / Marchy Lee / Shinya Michimi | Nissan GT-R Nismo GT3 (R35) | X Works | 1:37.7840 |
| 34 | Ryou Michigami / Hiroki Ootsu | Honda NSX-GT3 (NC1) | Modulo Drago Corse | 1:37.8170 |
| 4 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 (C190) | Goodsmile Racing & Team Ukyo | 1:37.8480 |
| 7 | Tomonobu Fujii / Joao Paolo de Oliveira / Darren Turner | Aston Martin Vantage GT3 (ABA-AM601) | D'Station Racing AMR | 1:37.8850 |
| 55 | Shinichi Takagi / Nirei Fukuzumi | Honda NSX-GT3 (NC1) | ARTA | 1:37.9700 |
| 65 | Haruki Kurosawa / Naoya Gamou | Mercedes-AMG GT3 (C190) | K2 R&D Leon Racing | 1:38.0730 |
| 87 | Tsubasa Takahashi / André Couto / Kiyoto Fujinami | Lamborghini Huracán GT3 | JLOC | 1:38.4130 |
| 21 | Richard Lyons / Ryuichiro Tomita / Alessio Picariello | Audi R8 LMS (ABA-4SCSPD) | Audi Team Hitotsuyama | 1:38.4490 |
| 88 | Takashi Kogure / Yuya Motojima | Lamborghini Huracán GT3 | JLOC | 1:38.5130 |
| 18 | Takashi Kobayashi / Kousuke Matsuura / Shin'nosuke Yamada | Honda NSX-GT3 (NC1) | Team Upgarage | 1:38.5260 |