| 23 | Tsugio Matsuda / Ronnie Quintarelli | Nissan GT-R (R35) | NISMO | 1:16.6020 |
| 12 | Daiki Sasaki / James Rossiter | Nissan GT-R (R35) | Team Impul | 1:16.8760 |
| 1 | Naoki Yamamoto / Jenson Button | Honda NSX-GT (NC1) | Team Kunimitsu | 1:16.9500 |
| 17 | Koudai Tsukakoshi / Bertrand Baguette | Honda NSX-GT (NC1) | Keihin Real Racing | 1:17.0880 |
| 8 | Tomoki Nojiri / Takuya Izawa | Honda NSX-GT (NC1) | ARTA | 1:17.2230 |
| 24 | Mitsunori Takaboshi / Jann Mardenborough | Nissan GT-R (R35) | Kondo Racing | 1:17.5310 |
| 37 | Ryō Hirakawa / Nick Cassidy | Lexus LC500 (URZ100) | Lexus Team KeePer Tom's | 1:17.6930 |
| 3 | Kouhei Hirate / Frédéric Makowiecki | Nissan GT-R (R35) | NDDP Racing with B-Max | 1:18.6800 |
| 55 | Shinichi Takagi / Nirei Fukuzumi | Honda NSX-GT3 (NC1) | ARTA | 1:24.8890 |
| 96 | Morio Nitta / Sena Sakaguchi | Lexus RC F GT3 (USC10) | K-tunes Racing | 1:24.9050 |
| 52 | Shigekazu Wakisaka / Hiroki Yoshida | Toyota Mark X (GRX133) | Saitama Toyopet Green Brave | 1:25.0910 |
| 65 | Haruki Kurosawa / Naoya Gamou | Mercedes-AMG GT3 (C190) | K2 R&D Leon Racing | 1:25.1860 |
| 25 | Takamitsu Matsui / Kimiya Satou | Toyota 86MC (ZN6) | Tsuchiya Engineering | 1:25.1950 |
| 5 | Natsu Sakaguchi / Yuuya Hiraki | Toyota 86MC (ZN6) | Team Mach | 1:25.2410 |
| 4 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 (C190) | Goodsmile Racing & Team Ukyo | 1:25.4880 |
| 56 | Kazuki Hiramine / Sacha Fenestraz | Nissan GT-R Nismo GT3 (R35) | Kondo Racing | 1:25.5660 |
| 61 | Takuto Iguchi / Hideki Yamauchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:25.5750 |
| 11 | Katsuyuki Hiranaka / Hironobu Yasuda | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:25.7180 |
| 10 | Kazuki Hoshino / Keishi Ishikawa | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:25.7360 |
| 60 | Hiroki Yoshimoto / Ritomo Miyata | Lexus RC F GT3 (USC10) | LM Corsa | 1:25.9740 |
| 34 | Ryou Michigami / Hiroki Ootsu | Honda NSX-GT3 (NC1) | Modulo Drago Corse | 1:26.1030 |
| 88 | Takashi Kogure / Yuya Motojima | Lamborghini Huracán GT3 | JLOC | 1:26.1560 |
| 33 | Shaun Thong / Marchy Lee | Nissan GT-R Nismo GT3 (R35) | X Works | 1:26.9330 |
| 2 | Kazuho Takahashi / Hiroki Katou | Lotus Evora (122) | Cars Tokai Dream28 | 1:29.1060 |