| 8 | Tomoki Nojiri / Nirei Fukuzumi | Honda NSX-GT (NC1) | ARTA | 1:44.9630 |
| 64 | Takuya Izawa / Hiroki Ootsu | Honda NSX-GT (NC1) | Modulo Nakajima Racing | 1:45.0540 |
| 19 | Yuuji Kunimoto / Ritomo Miyata | Toyota GR Supra (DB42) | TGR Team WedsSport Bandoh | 1:45.3480 |
| 12 | Daiki Sasaki / Kazuki Hiramine | Nissan GT-R (R35) | Team Impul | 1:45.6150 |
| 3 | Kouhei Hirate / Katsumasa Chiyo | Nissan GT-R (R35) | NDDP Racing with B-Max | 1:45.8900 |
| 16 | Hideki Mutou / Ukyo Sasahara | Honda NSX-GT (NC1) | Team Red Bull Mugen | 1:45.9200 |
| 38 | Yuuji Tachikawa / Hiroaki Ishiura | Toyota GR Supra (DB42) | TGR Team Zent Cerumo | 1:46.6640 |
| 100 | Naoki Yamamoto / Tadasuke Makino | Honda NSX-GT (NC1) | Team Kunimitsu | 1:46.9070 |
| 96 | Morio Nitta / Sena Sakaguchi | Lexus RC F GT3 (USC10) | K-tunes Racing | 1:55.8380 |
| 61 | Hideki Yamauchi / Takuto Iguchi | Subaru BRZ GT300 (DBA-ZC6) | R&D Sport | 1:56.0760 |
| 6 | Ryohei Sakaguchi / Kazuto Kotaka | Toyota 86MC (ZN6) | Advics Muta Racing Inging | 1:56.1560 |
| 18 | Takashi Kobayashi / Kousuke Matsuura | Honda NSX-GT3 (NC1) | Team Upgarage | 1:56.3400 |
| 11 | Katsuyuki Hiranaka / Hironobu Yasuda | Nissan GT-R Nismo GT3 (R35) | Gainer | 1:56.8190 |
| 21 | Shintarou Kawabata / Tsubasa Kondo | Audi R8 LMS FSI quattro (ABA-4SCSPD) | Audi Team Hitotsuyama | 1:56.8450 |
| 55 | Shinichi Takagi / Toshiki Ooyu | Honda NSX-GT3 (NC1) | ARTA | 1:56.8960 |
| 31 | Kouki Saga / Yuuki Nakayama | Toyota GR Sport Prius PHV (ZVW52) | Apr | 1:56.9260 |
| 360 | Takayuki Aoki / Takuya Otaki | Nissan GT-R Nismo GT3 (R35) | Tomei Sports | 1:56.9650 |
| 52 | Hiroki Yoshida / Kohta Kawaai | Toyota GR Supra (DB42) | Saitama Toyopet Green Brave | 1:57.2200 |
| 56 | Kiyoto Fujinami / Joao Paolo de Oliveira | Nissan GT-R Nismo GT3 (R35) | Kondo Racing | 1:57.4310 |
| 9 | Tomonobu Fujii / Kei Cozzolino | Aston Martin Vantage GT3 (16A-04) | Pacific D'station Racing | 1:57.4660 |
| 60 | Hiroki Yoshimoto / Syunsuke Kouno | Lexus RC F GT3 (USC10) | LM Corsa | 1:57.4720 |
| 4 | Nobuteru Taniguchi / Tatsuya Kataoka | Mercedes-AMG GT3 | Goodsmile Racing & Team Ukyo | 1:57.5640 |
| 30 | Hiroaki Nagai / Manabu Orido | Toyota GR Sport Prius PHV (ZVW52) | Apr | 1:57.9100 |
| 7 | Seiji Ara / Tomohide Yamaguchi | BMW M6 GT3 (F13) | BMW Team Satudie x CSL | 2:06.8900 |